SNP Detail For rs12668095
1.Mapping Information
Human SNP ID rs12668095
Human chromosome chr7
Human SNP position 47036178
Pig chromosome chr18
Pig SNP position 54109640
2.Annotation Information
PubMed ID26220383
JournalEpilepsy Res
Linkwww.ncbi.nlm.nih.gov/pubmed/26220383
StudyGWAS identifies two susceptibility loci for lamotrigine-induced skin rash in patients with epilepsy.
Disease/TraitEpilepsy and lamotrigine-induced maculopapular eruptions
Initial sample34 Korean ancestry cases, 1,080 Korean ancestry healthy controls
Replication sampleNA
Region7p12.3
Chromosome idchr7
Chromosome position47036178
Reported geneTNS3
Mapped geneLOC105375268
Upstream gene id
Downstream gene id
SNP gene ids105375268
Upstream gene distance
Downstream gene distance
SNP risk allelers12668095-C
SNPsrs12668095
Merged
SNP id current12668095
Contextintron_variant
Intergenic0
Allele frequency0.22
P value0.0000005
Pvalue mlog6.30102999566398
P value text
Or beta3.4
%95 Ci[NR]
PlatformAffymetrix [4893794] (imputed)
CNVN
Mapped traitresponse to lamotrigine, maculopapular eruption, epilepsy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007661, http://www.ebi.ac.uk/efo/EFO_1001253, http://www.ebi.ac.uk/efo/EFO_0000474
Study accessionGCST002949