Human SNP ID | rs12668095 |
---|---|
Human chromosome | chr7 |
Human SNP position | 47036178 |
Pig chromosome | chr18 |
Pig SNP position | 54109640 |
PubMed ID | 26220383 |
---|---|
Journal | Epilepsy Res |
Link | www.ncbi.nlm.nih.gov/pubmed/26220383 |
Study | GWAS identifies two susceptibility loci for lamotrigine-induced skin rash in patients with epilepsy. |
Disease/Trait | Epilepsy and lamotrigine-induced maculopapular eruptions |
Initial sample | 34 Korean ancestry cases, 1,080 Korean ancestry healthy controls |
Replication sample | NA |
Region | 7p12.3 |
Chromosome id | chr7 |
Chromosome position | 47036178 |
Reported gene | TNS3 |
Mapped gene | LOC105375268 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105375268 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12668095-C |
SNPs | rs12668095 |
Merged | |
SNP id current | 12668095 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.22 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | |
Or beta | 3.4 |
%95 Ci | [NR] |
Platform | Affymetrix [4893794] (imputed) |
CNV | N |
Mapped trait | response to lamotrigine, maculopapular eruption, epilepsy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007661, http://www.ebi.ac.uk/efo/EFO_1001253, http://www.ebi.ac.uk/efo/EFO_0000474 |
Study accession | GCST002949 |