SNP Detail For rs12666612
1.Mapping Information
Human SNP ID rs12666612
Human chromosome chr7
Human SNP position 18335622
Pig chromosome chr9
Pig SNP position 96529350
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region7p21.1
Chromosome idchr7
Chromosome position18335622
Reported geneHDAC9
Mapped geneHDAC9
Upstream gene id
Downstream gene id
SNP gene ids9734
Upstream gene distance
Downstream gene distance
SNP risk allelers12666612-G
SNPsrs12666612
Merged0
SNP id current12666612
Contextintron_variant
Intergenic0
Allele frequency0.088
P value0.000008
Pvalue mlog5.09691001300805
P value text(Vigorous activity )
Or beta0.03
%95 Ci[NR] min/d increase
PlatformIllumina [899892]
CNVN
Mapped traitphysical activity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003940
Study accessionGCST001762