SNP Detail For rs12659622
1.Mapping Information
Human SNP ID rs12659622
Human chromosome chr5
Human SNP position 15618072
Pig chromosome chr16
Pig SNP position 5257598
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region5p15.1
Chromosome idchr5
Chromosome position15618072
Reported geneFBXL7
Mapped geneFBXL7
Upstream gene id
Downstream gene id
SNP gene ids23194
Upstream gene distance
Downstream gene distance
SNP risk allelers12659622-A
SNPsrs12659622
Merged0
SNP id current12659622
Contextintron_variant
Intergenic0
Allele frequency0.063
P value0.0000009
Pvalue mlog6.04575749056067
P value text(Total T3 )
Or beta0.03
%95 Ci[NR] ng/dL increase
PlatformIllumina [899892]
CNVN
Mapped traithormone measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004730
Study accessionGCST001762