Human SNP ID | rs12658202 |
---|---|
Human chromosome | chr5 |
Human SNP position | 153599994 |
Pig chromosome | chr16 |
Pig SNP position | 75315349 |
PubMed ID | 19260139 |
---|---|
Journal | Croat Med J |
Link | www.ncbi.nlm.nih.gov/pubmed/19260139 |
Study | Genome-wide association study of anthropometric traits in Korcula Island, Croatia. |
Disease/Trait | Anthropometric traits |
Initial sample | 898 Korculan individuals |
Replication sample | NA |
Region | 5q33.2 |
Chromosome id | chr5 |
Chromosome position | 153599994 |
Reported gene | AMPA1, GRIA1 |
Mapped gene | GRIA1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2890 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12658202-? |
SNPs | rs12658202 |
Merged | 0 |
SNP id current | 12658202 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.45 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (height) |
Or beta | 0.11 |
%95 Ci | [0.06-0.16] mm increase |
Platform | Illumina [316730] |
CNV | N |
Mapped trait | body height, anthropometry |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339, http://www.ebi.ac.uk/efo/EFO_0004302 |
Study accession | GCST000327 |