SNP Detail For rs12658202
1.Mapping Information
Human SNP ID rs12658202
Human chromosome chr5
Human SNP position 153599994
Pig chromosome chr16
Pig SNP position 75315349
2.Annotation Information
PubMed ID19260139
JournalCroat Med J
Linkwww.ncbi.nlm.nih.gov/pubmed/19260139
StudyGenome-wide association study of anthropometric traits in Korcula Island, Croatia.
Disease/TraitAnthropometric traits
Initial sample898 Korculan individuals
Replication sampleNA
Region5q33.2
Chromosome idchr5
Chromosome position153599994
Reported geneAMPA1, GRIA1
Mapped geneGRIA1
Upstream gene id
Downstream gene id
SNP gene ids2890
Upstream gene distance
Downstream gene distance
SNP risk allelers12658202-?
SNPsrs12658202
Merged0
SNP id current12658202
Contextintron_variant
Intergenic0
Allele frequency0.45
P value0.000009
Pvalue mlog5.04575749056067
P value text(height)
Or beta0.11
%95 Ci[0.06-0.16] mm increase
PlatformIllumina [316730]
CNVN
Mapped traitbody height, anthropometry
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339, http://www.ebi.ac.uk/efo/EFO_0004302
Study accessionGCST000327