Human SNP ID | rs1265564 |
---|---|
Human chromosome | chr12 |
Human SNP position | 111270654 |
Pig chromosome | chr14 |
Pig SNP position | 34522015 |
PubMed ID | 22293688 |
---|---|
Journal | Eur J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22293688 |
Study | 1000 Genomes-based imputation identifies novel and refined associations for the Wellcome Trust Case Control Consortium phase 1 Data. |
Disease/Trait | Type 1 diabetes |
Initial sample | 16,179 European ancestry individuals |
Replication sample | NA |
Region | 12q24.11 |
Chromosome id | chr12 |
Chromosome position | 111270654 |
Reported gene | CUX2 |
Mapped gene | CUX2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23316 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1265564-? |
SNPs | rs1265564 |
Merged | 0 |
SNP id current | 1265564 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000000000000001 |
Pvalue mlog | 16 |
P value text | |
Or beta | 1.45 |
%95 Ci | [1.28-1.67] |
Platform | NR [6233112] (imputed) |
CNV | N |
Mapped trait | type I diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001359 |
Study accession | GCST001394 |