SNP Detail For rs1265564
1.Mapping Information
Human SNP ID rs1265564
Human chromosome chr12
Human SNP position 111270654
Pig chromosome chr14
Pig SNP position 34522015
2.Annotation Information
PubMed ID22293688
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22293688
Study1000 Genomes-based imputation identifies novel and refined associations for the Wellcome Trust Case Control Consortium phase 1 Data.
Disease/TraitType 1 diabetes
Initial sample16,179 European ancestry individuals
Replication sampleNA
Region12q24.11
Chromosome idchr12
Chromosome position111270654
Reported geneCUX2
Mapped geneCUX2
Upstream gene id
Downstream gene id
SNP gene ids23316
Upstream gene distance
Downstream gene distance
SNP risk allelers1265564-?
SNPsrs1265564
Merged0
SNP id current1265564
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequencyNR
P value0.0000000000000001
Pvalue mlog16
P value text
Or beta1.45
%95 Ci[1.28-1.67]
PlatformNR [6233112] (imputed)
CNVN
Mapped traittype I diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001359
Study accessionGCST001394