Human SNP ID | rs1265507 |
---|---|
Human chromosome | chr12 |
Human SNP position | 114430333 |
Pig chromosome | chr14 |
Pig SNP position | 40181587 |
PubMed ID | 22532574 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22532574 |
Study | Identification of a novel percent mammographic density locus at 12q24. |
Disease/Trait | Percent mammographic density |
Initial sample | 1,241 European ancestry female individuals |
Replication sample | 9,126 European ancestry individuals |
Region | 12q24.21 |
Chromosome id | chr12 |
Chromosome position | 114430333 |
Reported gene | TBX5, TBX3 |
Mapped gene | LOC105369998 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105369998 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1265507-? |
SNPs | rs1265507 |
Merged | 0 |
SNP id current | 1265507 |
Context | regulatory_region_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [2510880] |
CNV | N |
Mapped trait | breast carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000305 |
Study accession | GCST001489 |