Human SNP ID | rs12653117 |
---|---|
Human chromosome | chr5 |
Human SNP position | 9386473 |
Pig chromosome | chr16 |
Pig SNP position | 78907723 |
PubMed ID | 26562150 |
---|---|
Journal | Mol Med |
Link | www.ncbi.nlm.nih.gov/pubmed/26562150 |
Study | Genome-wide Association Study of Late-Onset Myasthenia Gravis: Confirmation of TNFRSF11A, and Identification of ZBTB10 and Three Distinct HLA Associations. |
Disease/Trait | Late-onset myasthenia gravis |
Initial sample | 532 European ancestry cases, 2,128 European ancestry controls |
Replication sample | NA |
Region | 5p15.31 |
Chromosome id | chr5 |
Chromosome position | 9386473 |
Reported gene | SEMA5A |
Mapped gene | SEMA5A |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9037 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12653117-T |
SNPs | rs12653117 |
Merged | 0 |
SNP id current | 12653117 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.08 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | |
Or beta | 1.76 |
%95 Ci | [1.42-2.17] |
Platform | Illumina [6175472] (imputed) |
CNV | N |
Mapped trait | late-onset myasthenia gravis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_1001490 |
Study accession | GCST003251 |