SNP Detail For rs1265159
1.Mapping Information
Human SNP ID rs1265159
Human chromosome chr6
Human SNP position 31172270
Pig chromosome chr7
Pig SNP position 27261417
2.Annotation Information
PubMed ID21323541
JournalN Engl J Med
Linkwww.ncbi.nlm.nih.gov/pubmed/21323541
StudyRisk HLA-DQA1 and PLA(2)R1 alleles in idiopathic membranous nephropathy.
Disease/TraitIdiopathic membranous nephropathy
Initial sample556 European ancestry cases, 2,338 European ancestry controls
Replication sampleNA
Region6p21.33
Chromosome idchr6
Chromosome position31172270
Reported geneintergenic
Mapped genePOU5F1 - PSORS1C3
Upstream gene id5460
Downstream gene id100130889
SNP gene ids
Upstream gene distance1577
Downstream gene distance1465
SNP risk allelers1265159-T
SNPsrs1265159
Merged0
SNP id current1265159
Contextintron_variant
Intergenic1
Allele frequency0.2191
P value4E-37
Pvalue mlog36.397940008672
P value text
Or beta2.42
%95 Ci[NR]
PlatformIllumina [242824]
CNVN
Mapped traitmembranous glomerulonephritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004254
Study accessionGCST000984