SNP Detail For rs12651329
1.Mapping Information
Human SNP ID rs12651329
Human chromosome chr4
Human SNP position 36077972
Pig chromosome chr8
Pig SNP position 29149879
2.Annotation Information
PubMed ID22959728
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/22959728
StudyAge of onset of amyotrophic lateral sclerosis is modulated by a locus on 1p34.1.
Disease/TraitAmyotrophic lateral sclerosis (age of onset)
Initial sample4,243 European ancestry cases
Replication sampleNA
Region4p14
Chromosome idchr4
Chromosome position36077972
Reported geneARAP2
Mapped geneARAP2
Upstream gene id
Downstream gene id
SNP gene ids116984
Upstream gene distance
Downstream gene distance
SNP risk allelers12651329-C
SNPsrs12651329
Merged0
SNP id current12651329
Contextintron_variant
Intergenic0
Allele frequency0.39
P value0.0000005
Pvalue mlog6.30102999566398
P value text(Joint)
Or beta
%95 Ci
PlatformIllumina [254145]
CNVN
Mapped traitamyotrophic lateral sclerosis, age at onset
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000253, http://www.ebi.ac.uk/efo/EFO_0004847
Study accessionGCST001663