Human SNP ID | rs12646107 |
---|---|
Human chromosome | chr4 |
Human SNP position | 173594531 |
Pig chromosome | chr14 |
Pig SNP position | 17595892 |
PubMed ID | 22952603 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/22952603 |
Study | Genome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13). |
Disease/Trait | Response to amphetamines |
Initial sample | 1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals |
Replication sample | NA |
Region | 4q34.1 |
Chromosome id | chr4 |
Chromosome position | 173594531 |
Reported gene | intergenic |
Mapped gene | LOC105377542 - RANP6 |
Upstream gene id | 105377542 |
Downstream gene id | 100128266 |
SNP gene ids | |
Upstream gene distance | 11363 |
Downstream gene distance | 39000 |
SNP risk allele | rs12646107-? |
SNPs | rs12646107 |
Merged | 0 |
SNP id current | 12646107 |
Context | non_coding_transcript_exon_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (SF8) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [5476100] (imputed) |
CNV | N |
Mapped trait | response to drug |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0042493 |
Study accession | GCST001651 |