Human SNP ID | rs12632235 |
---|---|
Human chromosome | chr3 |
Human SNP position | 100817440 |
Pig chromosome | chr13 |
Pig SNP position | 167779867 |
PubMed ID | 26365420 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26365420 |
Study | The genetics of alcohol dependence: Twin and SNP-based heritability, and genome-wide association study based on AUDIT scores. |
Disease/Trait | Alcohol dependence |
Initial sample | 1,374 European ancestry cases and 6,468 European ancestry controls from 7,694 twin pairs |
Replication sample | NA |
Region | 3q12.2 |
Chromosome id | chr3 |
Chromosome position | 100817440 |
Reported gene | ABI3BP |
Mapped gene | ABI3BP |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 25890 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12632235-T |
SNPs | rs12632235 |
Merged | |
SNP id current | 12632235 |
Context | synonymous_variant |
Intergenic | 0 |
Allele frequency | 0.01 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 2.173913 |
%95 Ci | [1.86-2.49] |
Platform | Affymetrix, Illumina, Perlegen [6464174] (imputed) |
CNV | N |
Mapped trait | alcohol dependence |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003829 |
Study accession | GCST003121 |