SNP Detail For rs12632235
1.Mapping Information
Human SNP ID rs12632235
Human chromosome chr3
Human SNP position 100817440
Pig chromosome chr13
Pig SNP position 167779867
2.Annotation Information
PubMed ID26365420
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26365420
StudyThe genetics of alcohol dependence: Twin and SNP-based heritability, and genome-wide association study based on AUDIT scores.
Disease/TraitAlcohol dependence
Initial sample1,374 European ancestry cases and 6,468 European ancestry controls from 7,694 twin pairs
Replication sampleNA
Region3q12.2
Chromosome idchr3
Chromosome position100817440
Reported geneABI3BP
Mapped geneABI3BP
Upstream gene id
Downstream gene id
SNP gene ids25890
Upstream gene distance
Downstream gene distance
SNP risk allelers12632235-T
SNPsrs12632235
Merged
SNP id current12632235
Contextsynonymous_variant
Intergenic0
Allele frequency0.01
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta2.173913
%95 Ci[1.86-2.49]
PlatformAffymetrix, Illumina, Perlegen [6464174] (imputed)
CNVN
Mapped traitalcohol dependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003829
Study accessionGCST003121