SNP Detail For rs1262778
1.Mapping Information
Human SNP ID rs1262778
Human chromosome chr13
Human SNP position 50492487
Pig chromosome chr11
Pig SNP position 17572923
2.Annotation Information
PubMed ID20351715
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/20351715
StudyMeta-analysis of genome-wide association data of bipolar disorder and major depressive disorder.
Disease/TraitBipolar disorder or major depressive disorder (combined)
Initial sample4,387 European ancestry bipolar cases, 1,695 European ancestry major depressive disorder cases, 7,970 European ancestry controls
Replication sampleNA
Region13q14.3
Chromosome idchr13
Chromosome position50492487
Reported geneintergenic
Mapped geneDLEU1
Upstream gene id
Downstream gene id
SNP gene ids10301
Upstream gene distance
Downstream gene distance
SNP risk allelers1262778-?
SNPsrs1262778
Merged0
SNP id current1262778
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta
%95 Ci
PlatformAffymetrix, Perlegen [1472580] (imputed)
CNVN
Mapped traitunipolar depression, bipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST000641