SNP Detail For rs12622534
1.Mapping Information
Human SNP ID rs12622534
Human chromosome chr2
Human SNP position 45772849
Pig chromosome chr3
Pig SNP position 100741796
2.Annotation Information
PubMed ID25918132
JournalToxicol Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/25918132
StudyGenome-wide association study identifies novel loci associated with diisocyanate-induced occupational asthma.
Disease/TraitDiisocyanate-induced asthma
Initial sample74 European ancestry cases, 824 European ancestry controls
Replication sampleNA
Region2p21
Chromosome idchr2
Chromosome position45772849
Reported genePRKCE, SRBD1, EPAS1
Mapped genePRKCE
Upstream gene id
Downstream gene id
SNP gene ids5581
Upstream gene distance
Downstream gene distance
SNP risk allelers12622534-A
SNPsrs12622534
Merged0
SNP id current12622534
Contextintron_variant
Intergenic0
Allele frequency0.407
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta2.26
%95 Ci[1.6-3.19]
PlatformIllumina [1556551]
CNVN
Mapped traitresponse to diisocyanate, asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006995, http://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002875