Human SNP ID | rs12621256 |
---|---|
Human chromosome | chr2 |
Human SNP position | 154377806 |
Pig chromosome | chr15 |
Pig SNP position | 69022545 |
PubMed ID | 24124411 |
---|---|
Journal | Genomics Inform |
Link | www.ncbi.nlm.nih.gov/pubmed/24124411 |
Study | Genome-wide association study of liver enzymes in korean children. |
Disease/Trait | Liver enzyme levels (alanine transaminase) |
Initial sample | 484 Korean ancestry children |
Replication sample | NA |
Region | 2q24.1 |
Chromosome id | chr2 |
Chromosome position | 154377806 |
Reported gene | GALNT13 |
Mapped gene | GALNT13 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 114805 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12621256-G |
SNPs | rs12621256 |
Merged | 0 |
SNP id current | 12621256 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.066 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.092 |
%95 Ci | [0.053-0.131] unit increase |
Platform | Illumina [747076] |
CNV | N |
Mapped trait | serum alanine aminotransferase measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004735 |
Study accession | GCST002207 |