SNP Detail For rs12618769
1.Mapping Information
Human SNP ID rs12618769
Human chromosome chr2
Human SNP position 98623468
Pig chromosome chr3
Pig SNP position 58215574
2.Annotation Information
PubMed ID21738484
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21738484
StudyGenome-wide association of bipolar disorder suggests an enrichment of replicable associations in regions near genes.
Disease/TraitBipolar disorder
Initial sample1,190 European and unknown ancestry cases, 401 European and unknown ancestry controls
Replication sample16,179 individuals
Region2q11.2
Chromosome idchr2
Chromosome position98623468
Reported geneMGAT4A
Mapped geneMGAT4A
Upstream gene id
Downstream gene id
SNP gene ids11320
Upstream gene distance
Downstream gene distance
SNP risk allelers12618769-T
SNPsrs12618769
Merged0
SNP id current12618769
Context3_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta1.25
%95 Ci[NR]
PlatformAffymetrix [703019]
CNVN
Mapped traitbipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST001135