SNP Detail For rs12612930
1.Mapping Information
Human SNP ID rs12612930
Human chromosome chr2
Human SNP position 71298655
Pig chromosome chr3
Pig SNP position 74811640
2.Annotation Information
PubMed ID23456168
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23456168
StudyGenome-wide association study in Han Chinese identifies three novel loci for human height.
Disease/TraitHeight
Initial sample6,534 Han Chinese ancestry individuals
Replication sample1,881 Han Chinese ancestry individuals from 637 families
Region2p13.3
Chromosome idchr2
Chromosome position71298655
Reported geneZNF638
Mapped geneLOC105374797 - ZNF638
Upstream gene id105374797
Downstream gene id27332
SNP gene ids
Upstream gene distance22210
Downstream gene distance33100
SNP risk allelers12612930-C
SNPsrs12612930
Merged0
SNP id current12612930
Contextintron_variant
Intergenic1
Allele frequency0.6
P value0.0000000002
Pvalue mlog9.69897000433601
P value text
Or beta0.1
%95 Ci[0.069-0.131] unit increase
PlatformAffymetrix [1532051] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001885