SNP Detail For rs12608544
1.Mapping Information
Human SNP ID rs12608544
Human chromosome chr19
Human SNP position 48633394
Pig chromosome chr6
Pig SNP position 49736296
2.Annotation Information
PubMed ID24941225
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24941225
StudyGenetic variations affecting serum carcinoembryonic antigen levels and status of regional lymph nodes in patients with sporadic colorectal cancer from Southern China.
Disease/TraitElevated serum carcinoembryonic antigen levels
Initial sample1,999 Chinese ancestry individuals
Replication sampleNA
Region19q13.33
Chromosome idchr19
Chromosome position48633394
Reported geneDBP
Mapped geneDBP
Upstream gene id
Downstream gene id
SNP gene ids1628
Upstream gene distance
Downstream gene distance
SNP risk allelers12608544-?
SNPsrs12608544
Merged0
SNP id current12608544
Context3_prime_UTR_variant
Intergenic0
Allele frequency
P value0.000000000002
Pvalue mlog11.698970004336
P value text
Or beta
%95 Ci
PlatformIllumina [709211] (imputed)
CNVN
Mapped traitserum carcinoembryonic antigen measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005760
Study accessionGCST002485