SNP Detail For rs12607903
1.Mapping Information
Human SNP ID rs12607903
Human chromosome chr18
Human SNP position 3817134
Pig chromosome chr6
Pig SNP position 95908767
2.Annotation Information
PubMed ID25231870
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25231870
StudyParent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
Disease/TraitMenarche (age at onset)
Initial sampleUp to 182,413 European ancestry females
Replication sampleNA
Region18p11.31
Chromosome idchr18
Chromosome position3817134
Reported geneDLGAP1
Mapped geneDLGAP1
Upstream gene id
Downstream gene id
SNP gene ids9229
Upstream gene distance
Downstream gene distance
SNP risk allelers12607903-C
SNPsrs12607903
Merged0
SNP id current12607903
Contextintron_variant
Intergenic0
Allele frequency0.3
P value0.00000000005
Pvalue mlog10.3010299956639
P value text
Or beta0.04
%95 Ci[0.03-0.05] unit increase
PlatformAffymetrix, Illumina [2441815] (imputed)
CNVN
Mapped traitage at menarche
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004703
Study accessionGCST002541