SNP Detail For rs12602978
1.Mapping Information
Human SNP ID rs12602978
Human chromosome chr17
Human SNP position 27240054
Pig chromosome chr12
Pig SNP position 45616768
2.Annotation Information
PubMed ID23064961
JournalJ Dent Res
Linkwww.ncbi.nlm.nih.gov/pubmed/23064961
StudyGWAS of dental caries patterns in the permanent dentition.
Disease/TraitDental caries
Initial sample920 European ancestry individuals
Replication sampleNA
Region17q11.1
Chromosome idchr17
Chromosome position27240054
Reported geneWSB1
Mapped geneLOC105371704 - RPS16P8
Upstream gene id105371704
Downstream gene id654170
SNP gene ids
Upstream gene distance8256
Downstream gene distance40375
SNP risk allelers12602978-?
SNPsrs12602978
Merged0
SNP id current12602978
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.0000007
Pvalue mlog6.15490195998574
P value text(DMFS5mand)
Or beta
%95 Ci
PlatformIllumina [518997]
CNVN
Mapped traitdental caries
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003819
Study accessionGCST001713