Human SNP ID | rs12602978 |
---|---|
Human chromosome | chr17 |
Human SNP position | 27240054 |
Pig chromosome | chr12 |
Pig SNP position | 45616768 |
PubMed ID | 23064961 |
---|---|
Journal | J Dent Res |
Link | www.ncbi.nlm.nih.gov/pubmed/23064961 |
Study | GWAS of dental caries patterns in the permanent dentition. |
Disease/Trait | Dental caries |
Initial sample | 920 European ancestry individuals |
Replication sample | NA |
Region | 17q11.1 |
Chromosome id | chr17 |
Chromosome position | 27240054 |
Reported gene | WSB1 |
Mapped gene | LOC105371704 - RPS16P8 |
Upstream gene id | 105371704 |
Downstream gene id | 654170 |
SNP gene ids | |
Upstream gene distance | 8256 |
Downstream gene distance | 40375 |
SNP risk allele | rs12602978-? |
SNPs | rs12602978 |
Merged | 0 |
SNP id current | 12602978 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | (DMFS5mand) |
Or beta | |
%95 Ci | |
Platform | Illumina [518997] |
CNV | N |
Mapped trait | dental caries |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003819 |
Study accession | GCST001713 |