SNP Detail For rs12595433
1.Mapping Information
Human SNP ID rs12595433
Human chromosome chr15
Human SNP position 62998446
Pig chromosome chr1
Pig SNP position 120281890
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region15q22.2
Chromosome idchr15
Chromosome position62998446
Reported geneLOC100287243
Mapped geneLOC100287243 - TPM1
Upstream gene id100287243
Downstream gene id7168
SNP gene ids
Upstream gene distance44181
Downstream gene distance44193
SNP risk allelers12595433-A
SNPsrs12595433
Merged0
SNP id current12595433
Contextintergenic_variant
Intergenic1
Allele frequency0.464
P value0.000005
Pvalue mlog5.30102999566398
P value text(Weight z-score )
Or beta0.03
%95 Ci[NR] SD increase
PlatformIllumina [899892]
CNVN
Mapped traitbody weight
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004338
Study accessionGCST001762