Human SNP ID | rs12595433 |
---|---|
Human chromosome | chr15 |
Human SNP position | 62998446 |
Pig chromosome | chr1 |
Pig SNP position | 120281890 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 15q22.2 |
Chromosome id | chr15 |
Chromosome position | 62998446 |
Reported gene | LOC100287243 |
Mapped gene | LOC100287243 - TPM1 |
Upstream gene id | 100287243 |
Downstream gene id | 7168 |
SNP gene ids | |
Upstream gene distance | 44181 |
Downstream gene distance | 44193 |
SNP risk allele | rs12595433-A |
SNPs | rs12595433 |
Merged | 0 |
SNP id current | 12595433 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.464 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (Weight z-score ) |
Or beta | 0.03 |
%95 Ci | [NR] SD increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | body weight |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004338 |
Study accession | GCST001762 |