SNP Detail For rs12595305
1.Mapping Information
Human SNP ID rs12595305
Human chromosome chr15
Human SNP position 89356393
Pig chromosome chr7
Pig SNP position 59909900
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region15q26.1
Chromosome idchr15
Chromosome position89356393
Reported geneNR
Mapped geneLOC105370962 - MIR9-3
Upstream gene id105370962
Downstream gene id407051
SNP gene ids
Upstream gene distance20232
Downstream gene distance11624
SNP risk allelers12595305-T
SNPsrs12595305
Merged
SNP id current12595305
Contextupstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta1.05
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048