SNP Detail For rs12570188
1.Mapping Information
Human SNP ID rs12570188
Human chromosome chr10
Human SNP position 99095945
Pig chromosome chr14
Pig SNP position 119719375
2.Annotation Information
PubMed ID23829686
JournalHum Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/23829686
StudyRank-based genome-wide analysis reveals the association of ryanodine receptor-2 gene variants with childhood asthma among human populations.
Disease/TraitAsthma (childhood onset)
Initial sample429 European ancestry affected offspring trios
Replication sample52 African American affected offspring trios, 46 Hispanic affected offspring trios
Region10q24.2
Chromosome idchr10
Chromosome position99095945
Reported geneHPSE2
Mapped geneHPSE2
Upstream gene id
Downstream gene id
SNP gene ids60495
Upstream gene distance
Downstream gene distance
SNP risk allelers12570188-?
SNPsrs12570188
Merged0
SNP id current12570188
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000005
Pvalue mlog7.30102999566398
P value text
Or beta
%95 Ci
PlatformAffymetrix [786195]
CNVN
Mapped traitchildhood onset asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004591
Study accessionGCST002088