Human SNP ID | rs12570188 |
---|---|
Human chromosome | chr10 |
Human SNP position | 99095945 |
Pig chromosome | chr14 |
Pig SNP position | 119719375 |
PubMed ID | 23829686 |
---|---|
Journal | Hum Genomics |
Link | www.ncbi.nlm.nih.gov/pubmed/23829686 |
Study | Rank-based genome-wide analysis reveals the association of ryanodine receptor-2 gene variants with childhood asthma among human populations. |
Disease/Trait | Asthma (childhood onset) |
Initial sample | 429 European ancestry affected offspring trios |
Replication sample | 52 African American affected offspring trios, 46 Hispanic affected offspring trios |
Region | 10q24.2 |
Chromosome id | chr10 |
Chromosome position | 99095945 |
Reported gene | HPSE2 |
Mapped gene | HPSE2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 60495 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12570188-? |
SNPs | rs12570188 |
Merged | 0 |
SNP id current | 12570188 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000005 |
Pvalue mlog | 7.30102999566398 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [786195] |
CNV | N |
Mapped trait | childhood onset asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004591 |
Study accession | GCST002088 |