SNP Detail For rs12563333
1.Mapping Information
Human SNP ID rs12563333
Human chromosome chr1
Human SNP position 220484892
Pig chromosome chr10
Pig SNP position 12032867
2.Annotation Information
PubMed ID22205951
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22205951
StudyGenome-wide association study in bipolar patients stratified by co-morbidity.
Disease/TraitBipolar disorder
Initial sample1,000 European ancestry cases, 1,034 European ancestry controls
Replication sampleNA
Region1q41
Chromosome idchr1
Chromosome position220484892
Reported geneMARK1
Mapped geneLOC105372929
Upstream gene id
Downstream gene id
SNP gene ids105372929
Upstream gene distance
Downstream gene distance
SNP risk allelers12563333-?
SNPsrs12563333
Merged0
SNP id current12563333
Contextdownstream_gene_variant
Intergenic0
Allele frequencyNR
P value0.00000006
Pvalue mlog7.22184874961635
P value text(Latent Class 1)
Or beta
%95 Ci
PlatformAffymetrix [728331]
CNVN
Mapped traitbipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST001359