Human SNP ID | rs12555078 |
---|---|
Human chromosome | chr9 |
Human SNP position | 73542784 |
Pig chromosome | chr1 |
Pig SNP position | 253403204 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 9q21.13 |
Chromosome id | chr9 |
Chromosome position | 73542784 |
Reported gene | LOC138972 |
Mapped gene | DPP3P2 - LOC105376085 |
Upstream gene id | 138971 |
Downstream gene id | 105376085 |
SNP gene ids | |
Upstream gene distance | 66704 |
Downstream gene distance | 30831 |
SNP risk allele | rs12555078-A |
SNPs | rs12555078 |
Merged | 0 |
SNP id current | 12555078 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.098 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (RANTES ) |
Or beta | 0.03 |
%95 Ci | [NR] pg/mL increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | CCL5 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005117 |
Study accession | GCST001762 |