SNP Detail For rs12555078
1.Mapping Information
Human SNP ID rs12555078
Human chromosome chr9
Human SNP position 73542784
Pig chromosome chr1
Pig SNP position 253403204
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region9q21.13
Chromosome idchr9
Chromosome position73542784
Reported geneLOC138972
Mapped geneDPP3P2 - LOC105376085
Upstream gene id138971
Downstream gene id105376085
SNP gene ids
Upstream gene distance66704
Downstream gene distance30831
SNP risk allelers12555078-A
SNPsrs12555078
Merged0
SNP id current12555078
Contextintergenic_variant
Intergenic1
Allele frequency0.098
P value0.000002
Pvalue mlog5.69897000433601
P value text(RANTES )
Or beta0.03
%95 Ci[NR] pg/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitCCL5 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005117
Study accessionGCST001762