Human SNP ID | rs12554086 |
---|---|
Human chromosome | chr9 |
Human SNP position | 80192588 |
Pig chromosome | chr1 |
Pig SNP position | 259915137 |
PubMed ID | 20031603 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20031603 |
Study | A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project. |
Disease/Trait | RR interval (heart rate) |
Initial sample | 2,325 European ancestry individuals |
Replication sample | NA |
Region | 9q21.31 |
Chromosome id | chr9 |
Chromosome position | 80192588 |
Reported gene | intergenic |
Mapped gene | LINC01507 - LOC105376102 |
Upstream gene id | 101927477 |
Downstream gene id | 105376102 |
SNP gene ids | |
Upstream gene distance | 158033 |
Downstream gene distance | 76941 |
SNP risk allele | rs12554086-A |
SNPs | rs12554086 |
Merged | 0 |
SNP id current | 12554086 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.39 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | 0.16 |
%95 Ci | [0.10-0.22] unit decrease |
Platform | Illumina [~ 318327] |
CNV | N |
Mapped trait | RR interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004831 |
Study accession | GCST000451 |