SNP Detail For rs12552369
1.Mapping Information
Human SNP ID rs12552369
Human chromosome chr9
Human SNP position 132757106
Pig chromosome chr1
Pig SNP position 306557971
2.Annotation Information
PubMed ID23377640
JournalAm J Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23377640
StudyCommon genetic variation and antidepressant efficacy in major depressive disorder: a meta-analysis of three genome-wide pharmacogenetic studies.
Disease/TraitMajor depressive disorder
Initial sampleUp to 2,256 European ancestry cases
Replication sampleNA
Region9q34.13
Chromosome idchr9
Chromosome position132757106
Reported geneC9orf98
Mapped geneAK8
Upstream gene id
Downstream gene id
SNP gene ids158067
Upstream gene distance
Downstream gene distance
SNP risk allelers12552369-A
SNPsrs12552369
Merged0
SNP id current12552369
Contextintron_variant
Intergenic0
Allele frequency0.494
P value0.000008
Pvalue mlog5.09691001300805
P value text(% improvement - 2 weeks)
Or beta1.155
%95 Ci[1.1-1.21]
PlatformAffymetrix, Illumina [1200000] (imputed)
CNVN
Mapped traitunipolar depression
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761
Study accessionGCST001850