Human SNP ID | rs12542743 |
---|---|
Human chromosome | chr8 |
Human SNP position | 32460839 |
Pig chromosome | chr15 |
Pig SNP position | 60260807 |
PubMed ID | 24324551 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/24324551 |
Study | Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects. |
Disease/Trait | Chagas cardiomyopathy in Tripanosoma cruzi seropositivity |
Initial sample | 207 Brazilian ancestry cases, 306 Brazilian ancestry controls |
Replication sample | NA |
Region | 8p12 |
Chromosome id | chr8 |
Chromosome position | 32460839 |
Reported gene | NR |
Mapped gene | NRG1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3084 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12542743-? |
SNPs | rs12542743 |
Merged | 0 |
SNP id current | 12542743 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [5486770] (imputed) |
CNV | N |
Mapped trait | Chagas cardiomyopathy, Trypanosoma cruzi seropositivity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005529, http://www.ebi.ac.uk/efo/EFO_0005530 |
Study accession | GCST002285 |