SNP Detail For rs12524865
1.Mapping Information
Human SNP ID rs12524865
Human chromosome chr6
Human SNP position 133875536
Pig chromosome chr1
Pig SNP position 33495341
2.Annotation Information
PubMed ID22751097
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22751097
StudyGenome-wide association study in Han Chinese identifies four new susceptibility loci for coronary artery disease.
Disease/TraitCoronary heart disease
Initial sample1,515 Han Chinese ancestry cases, 5,019 Han Chinese ancestry controls
Replication sample15,460 Han Chinese ancestry cases, 11,472 Han Chinese ancestry controls
Region6q23.2
Chromosome idchr6
Chromosome position133875536
Reported geneTCF21
Mapped geneTARID
Upstream gene id
Downstream gene id
SNP gene ids100507308
Upstream gene distance
Downstream gene distance
SNP risk allelers12524865-C
SNPsrs12524865
Merged0
SNP id current12524865
Contextintron_variant
Intergenic0
Allele frequency0.61
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta1.11
%95 Ci[1.06-1.16]
PlatformAffymetrix [~ 2200000] (imputed)
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST001587