Human SNP ID | rs12524865 |
---|---|
Human chromosome | chr6 |
Human SNP position | 133875536 |
Pig chromosome | chr1 |
Pig SNP position | 33495341 |
PubMed ID | 22751097 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22751097 |
Study | Genome-wide association study in Han Chinese identifies four new susceptibility loci for coronary artery disease. |
Disease/Trait | Coronary heart disease |
Initial sample | 1,515 Han Chinese ancestry cases, 5,019 Han Chinese ancestry controls |
Replication sample | 15,460 Han Chinese ancestry cases, 11,472 Han Chinese ancestry controls |
Region | 6q23.2 |
Chromosome id | chr6 |
Chromosome position | 133875536 |
Reported gene | TCF21 |
Mapped gene | TARID |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100507308 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12524865-C |
SNPs | rs12524865 |
Merged | 0 |
SNP id current | 12524865 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.61 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | |
Or beta | 1.11 |
%95 Ci | [1.06-1.16] |
Platform | Affymetrix [~ 2200000] (imputed) |
CNV | N |
Mapped trait | coronary heart disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001645 |
Study accession | GCST001587 |