SNP Detail For rs12500138
1.Mapping Information
Human SNP ID rs12500138
Human chromosome chr4
Human SNP position 165226560
Pig chromosome chr8
Pig SNP position 45768808
2.Annotation Information
PubMed ID24684796
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/24684796
StudyHeritability and genetic association analysis of cognition in the Diabetes Heart Study.
Disease/TraitCognitive function
Initial sample423 type 2 diabetes cases and 127 unaffected siblings from 257 families
Replication sampleNA
Region4q32.3
Chromosome idchr4
Chromosome position165226560
Reported geneKLHL2
Mapped geneKLHL2
Upstream gene id
Downstream gene id
SNP gene ids11275
Upstream gene distance
Downstream gene distance
SNP risk allelers12500138-T
SNPsrs12500138
Merged0
SNP id current12500138
Contextintron_variant
Intergenic0
Allele frequency0.051
P value0.000006
Pvalue mlog5.22184874961635
P value text(Stroop)
Or beta0.2839
%95 Ci[0.16-0.41] unit increase
PlatformAffymetrix [> 371951] (imputed)
CNVN
Mapped traitcognition
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003925
Study accessionGCST002386