Human SNP ID | rs12489120 |
---|---|
Human chromosome | chr3 |
Human SNP position | 4978778 |
Pig chromosome | chr13 |
Pig SNP position | 67831796 |
PubMed ID | 26626624 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26626624 |
Study | Genome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture. |
Disease/Trait | Psoriasis vulgaris |
Initial sample | 4,007 European ancestry cases, 4,934 European ancestry controls |
Replication sample | up to 9,075 European ancestry cases, up to European ancestry 12,726 controls |
Region | 3p26.1 |
Chromosome id | chr3 |
Chromosome position | 4978778 |
Reported gene | BHLHE40 |
Mapped gene | BHLHE40-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100507582 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12489120-C |
SNPs | rs12489120 |
Merged | 0 |
SNP id current | 12489120 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | |
Or beta | 1.3 |
%95 Ci | NR |
Platform | Illumina [up to 11532644] (imputed) |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003268 |