Human SNP ID | rs12483205 |
---|---|
Human chromosome | chr21 |
Human SNP position | 37368522 |
Pig chromosome | chr13 |
Pig SNP position | 211099278 |
PubMed ID | 21364930 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/21364930 |
Study | Genome-wide association study identifies single nucleotide polymorphism in DYRK1A associated with replication of HIV-1 in monocyte-derived macrophages. |
Disease/Trait | HIV-1 replication |
Initial sample | 191 European ancestry individuals |
Replication sample | 31 individuals |
Region | 21q22.13 |
Chromosome id | chr21 |
Chromosome position | 37368522 |
Reported gene | DYRK1A |
Mapped gene | DYRK1A |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1859 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12483205-? |
SNPs | rs12483205 |
Merged | 0 |
SNP id current | 12483205 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [494656] |
CNV | N |
Mapped trait | HIV-1 infection |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000180 |
Study accession | GCST000990 |