SNP Detail For rs12480819
1.Mapping Information
Human SNP ID rs12480819
Human chromosome chr20
Human SNP position 17611655
Pig chromosome chr17
Pig SNP position 29458516
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine - clinic-based
Initial sample5,175 European ancestry clinic-based cases, 13,972 European ancestry clinic-based controls
Replication sampleNA
Region20p12.1
Chromosome idchr20
Chromosome position17611655
Reported geneintergenic
Mapped geneDSTN - RRBP1
Upstream gene id11034
Downstream gene id6238
SNP gene ids
Upstream gene distance3413
Downstream gene distance2023
SNP risk allelers12480819-G
SNPsrs12480819
Merged0
SNP id current12480819
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.24
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.15
%95 Ci[1.08-1.22]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002079