Human SNP ID | rs12480819 |
---|---|
Human chromosome | chr20 |
Human SNP position | 17611655 |
Pig chromosome | chr17 |
Pig SNP position | 29458516 |
PubMed ID | 23793025 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23793025 |
Study | Genome-wide meta-analysis identifies new susceptibility loci for migraine. |
Disease/Trait | Migraine - clinic-based |
Initial sample | 5,175 European ancestry clinic-based cases, 13,972 European ancestry clinic-based controls |
Replication sample | NA |
Region | 20p12.1 |
Chromosome id | chr20 |
Chromosome position | 17611655 |
Reported gene | intergenic |
Mapped gene | DSTN - RRBP1 |
Upstream gene id | 11034 |
Downstream gene id | 6238 |
SNP gene ids | |
Upstream gene distance | 3413 |
Downstream gene distance | 2023 |
SNP risk allele | rs12480819-G |
SNPs | rs12480819 |
Merged | 0 |
SNP id current | 12480819 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.24 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.15 |
%95 Ci | [1.08-1.22] |
Platform | Affymetrix, Illumina [~ 2300000] (imputed) |
CNV | N |
Mapped trait | migraine disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003821 |
Study accession | GCST002079 |