Human SNP ID | rs12476289 |
---|---|
Human chromosome | chr2 |
Human SNP position | 178777248 |
Pig chromosome | chr15 |
Pig SNP position | 93967669 |
PubMed ID | 20031603 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20031603 |
Study | A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project. |
Disease/Trait | QT interval |
Initial sample | 2,325 European ancestry individuals |
Replication sample | NA |
Region | 2q31.2 |
Chromosome id | chr2 |
Chromosome position | 178777248 |
Reported gene | TTN |
Mapped gene | TTN, LOC101927055 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 7273, 101927055 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12476289-A |
SNPs | rs12476289 |
Merged | 0 |
SNP id current | 12476289 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.07 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.29 |
%95 Ci | [0.17-0.41] unit increase |
Platform | Illumina [~ 318327] |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST000452 |