SNP Detail For rs12467847
1.Mapping Information
Human SNP ID rs12467847
Human chromosome chr2
Human SNP position 112933827
Pig chromosome chr11
Pig SNP position 3601629
2.Annotation Information
PubMed ID22952603
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22952603
StudyGenome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13).
Disease/TraitResponse to amphetamines
Initial sample1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals
Replication sampleNA
Region2q14.1
Chromosome idchr2
Chromosome position112933827
Reported geneintergenic
Mapped geneLOC100287419 - IL36G
Upstream gene id100287419
Downstream gene id56300
SNP gene ids
Upstream gene distance28
Downstream gene distance38502
SNP risk allelers12467847-?
SNPsrs12467847
Merged0
SNP id current12467847
Contextdownstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text(SF4)
Or beta
%95 Ci
PlatformAffymetrix [5476100] (imputed)
CNVN
Mapped traitresponse to drug
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042493
Study accessionGCST001651