Human SNP ID | rs12466022 |
---|---|
Human chromosome | chr2 |
Human SNP position | 43131922 |
Pig chromosome | chr3 |
Pig SNP position | 103341892 |
PubMed ID | 21833088 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/21833088 |
Study | Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. |
Disease/Trait | Multiple sclerosis |
Initial sample | 9,772 European ancestry cases, 16,849 European ancestry controls |
Replication sample | 4,218 European ancestry cases, 7,296 European ancestry controls |
Region | 2p21 |
Chromosome id | chr2 |
Chromosome position | 43131922 |
Reported gene | intergenic |
Mapped gene | LOC100506047, LOC105374570 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100506047, 105374570 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12466022-C |
SNPs | rs12466022 |
Merged | 0 |
SNP id current | 12466022 |
Context | regulatory_region_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000000006 |
Pvalue mlog | 9.22184874961635 |
P value text | |
Or beta | 1.11 |
%95 Ci | [1.1-1.13] |
Platform | Illumina [465434] |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST001198 |