Human SNP ID | rs12454712 |
---|---|
Human chromosome | chr18 |
Human SNP position | 63178651 |
Pig chromosome | chr1 |
Pig SNP position | 175946946 |
PubMed ID | 25673413 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 18q21.33 |
Chromosome id | chr18 |
Chromosome position | 63178651 |
Reported gene | BCL2 |
Mapped gene | BCL2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 596 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12454712-C |
SNPs | rs12454712 |
Merged | 0 |
SNP id current | 12454712 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.397 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.017 |
%95 Ci | [0.0095-0.0241] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |
PubMed ID | 25673412 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 18q21.33 |
Chromosome id | chr18 |
Chromosome position | 63178651 |
Reported gene | BCL2 |
Mapped gene | BCL2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 596 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12454712-T |
SNPs | rs12454712 |
Merged | 0 |
SNP id current | 12454712 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.6089 |
P value | 0.000000001 |
Pvalue mlog | 9 |
P value text | (EA, women) |
Or beta | 0.0347 |
%95 Ci | [0.024-0.046] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |
PubMed ID | 25673412 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 18q21.33 |
Chromosome id | chr18 |
Chromosome position | 63178651 |
Reported gene | BCL2 |
Mapped gene | BCL2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 596 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12454712-T |
SNPs | rs12454712 |
Merged | 0 |
SNP id current | 12454712 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.6149 |
P value | 0.000000003 |
Pvalue mlog | 8.52287874528033 |
P value text | (women) |
Or beta | 0.0329 |
%95 Ci | [0.022-0.044] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |