SNP Detail For rs12454023
1.Mapping Information
Human SNP ID rs12454023
Human chromosome chr18
Human SNP position 58342372
Pig chromosome JH118631-1
Pig SNP position 12108
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine with aura
Initial sample5,118 European ancestry cases, 74,239 European ancestry controls
Replication sampleNA
Region18q21.31
Chromosome idchr18
Chromosome position58342372
Reported geneintergenic
Mapped geneNEDD4L
Upstream gene id
Downstream gene id
SNP gene ids23327
Upstream gene distance
Downstream gene distance
SNP risk allelers12454023-?
SNPsrs12454023
Merged0
SNP id current12454023
Contextintron_variant
Intergenic0
Allele frequency0.5
P value0.0000008
Pvalue mlog6.09691001300805
P value text
Or beta1.12
%95 Ci[1.08-1.18]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002080