Human SNP ID | rs12446940 |
---|---|
Human chromosome | chr16 |
Human SNP position | 3912619 |
Pig chromosome | chr3 |
Pig SNP position | 39440468 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Neurofibrillary tangles |
Initial sample | up to 4,707 individuals |
Replication sample | NA |
Region | 16p13.3 |
Chromosome id | chr16 |
Chromosome position | 3912619 |
Reported gene | intergenic |
Mapped gene | CREBBP - LOC102724927 |
Upstream gene id | 1387 |
Downstream gene id | 102724927 |
SNP gene ids | |
Upstream gene distance | 32499 |
Downstream gene distance | 34990 |
SNP risk allele | rs12446940-A |
SNPs | rs12446940 |
Merged | 0 |
SNP id current | 12446940 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.3563 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (Ordinal I) |
Or beta | 0.1929 |
%95 Ci | [0.11-0.27] unit increase |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | neurofibrilliary tangles measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006797 |
Study accession | GCST002594 |