SNP Detail For rs12445568
1.Mapping Information
Human SNP ID rs12445568
Human chromosome chr16
Human SNP position 30993491
Pig chromosome chr3
Pig SNP position 17848464
2.Annotation Information
PubMed ID26626624
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26626624
StudyGenome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture.
Disease/TraitPsoriasis vulgaris
Initial sample4,007 European ancestry cases, 4,934 European ancestry controls
Replication sampleup to 9,075 European ancestry cases, up to European ancestry 12,726 controls
Region16p11.2
Chromosome idchr16
Chromosome position30993491
Reported genePRSS53, FBXL19
Mapped geneSTX1B
Upstream gene id
Downstream gene id
SNP gene ids112755
Upstream gene distance
Downstream gene distance
SNP risk allelers12445568-C
SNPsrs12445568
Merged0
SNP id current12445568
Contextsplice_region_variant
Intergenic0
Allele frequencyNR
P value0.00000000005
Pvalue mlog10.3010299956639
P value text
Or beta1.159
%95 CiNR
PlatformIllumina [up to 11532644] (imputed)
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003268