Human SNP ID | rs12445568 |
---|---|
Human chromosome | chr16 |
Human SNP position | 30993491 |
Pig chromosome | chr3 |
Pig SNP position | 17848464 |
PubMed ID | 26626624 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26626624 |
Study | Genome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture. |
Disease/Trait | Psoriasis vulgaris |
Initial sample | 4,007 European ancestry cases, 4,934 European ancestry controls |
Replication sample | up to 9,075 European ancestry cases, up to European ancestry 12,726 controls |
Region | 16p11.2 |
Chromosome id | chr16 |
Chromosome position | 30993491 |
Reported gene | PRSS53, FBXL19 |
Mapped gene | STX1B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 112755 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12445568-C |
SNPs | rs12445568 |
Merged | 0 |
SNP id current | 12445568 |
Context | splice_region_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000000005 |
Pvalue mlog | 10.3010299956639 |
P value text | |
Or beta | 1.159 |
%95 Ci | NR |
Platform | Illumina [up to 11532644] (imputed) |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003268 |