SNP Detail For rs12428086
1.Mapping Information
Human SNP ID rs12428086
Human chromosome chr13
Human SNP position 35866962
Pig chromosome chr11
Pig SNP position 11867321
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region13q13.3
Chromosome idchr13
Chromosome position35866962
Reported geneDCLK1
Mapped geneLOC105370163, DCLK1
Upstream gene id
Downstream gene id
SNP gene ids105370163, 9201
Upstream gene distance
Downstream gene distance
SNP risk allelers12428086-G
SNPsrs12428086
Merged0
SNP id current12428086
Contextintron_variant
Intergenic0
Allele frequency0.374
P value0.000005
Pvalue mlog5.30102999566398
P value text(Dinner intake )
Or beta0.04
%95 Ci[NR] kcal increase
PlatformIllumina [899892]
CNVN
Mapped traitenergy intake
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003939
Study accessionGCST001762