Human SNP ID | rs12416687 |
---|---|
Human chromosome | chr10 |
Human SNP position | 102869254 |
Pig chromosome | chr14 |
Pig SNP position | 123816275 |
PubMed ID | 24954895 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24954895 |
Study | Gene-age interactions in blood pressure regulation: a large-scale investigation with the CHARGE, Global BPgen, and ICBP Consortia. |
Disease/Trait | Blood pressure |
Initial sample | 55,796 European ancestry individuals |
Replication sample | 43,445 European ancestry individuals, 1,849 Chinese ancestry individuals, 2,502 Malay ancestry individuals, 2,476 Asian Indian ancestry individuals, 1,855 Asian ancestry individuals |
Region | 10q24.32 |
Chromosome id | chr10 |
Chromosome position | 102869254 |
Reported gene | AS3MT |
Mapped gene | LOC105378462, C10orf32-ASMT |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105378462, 100528007 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12416687-T |
SNPs | rs12416687 |
Merged | 0 |
SNP id current | 12416687 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000000004 |
Pvalue mlog | 8.39794000867203 |
P value text | (EA, MAP, Age 50-59) |
Or beta | 0.59 |
%95 Ci | [0.39-0.79] mmHg decrease |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | mean arterial pressure |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006340 |
Study accession | GCST002497 |