SNP Detail For rs12412942
1.Mapping Information
Human SNP ID rs12412942
Human chromosome chr10
Human SNP position 2315508
Pig chromosome chr10
Pig SNP position 74197344
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample1,505 Ashkenazi Jewish founder cases, 2,553 Ashkenazi Jewish founder controls
Replication sampleNA
Region10p15.3
Chromosome idchr10
Chromosome position2315508
Reported geneLINC00701
Mapped geneLINC00701 - LOC105376349
Upstream gene id399708
Downstream gene id105376349
SNP gene ids
Upstream gene distance434
Downstream gene distance2918
SNP risk allelers12412942-A
SNPsrs12412942
Merged
SNP id current12412942
Contextupstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.0000008
Pvalue mlog6.09691001300805
P value text
Or beta1.2820514
%95 Ci[NR]
PlatformIllumina [up to 9792010] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003050