Human SNP ID | rs12412942 |
---|---|
Human chromosome | chr10 |
Human SNP position | 2315508 |
Pig chromosome | chr10 |
Pig SNP position | 74197344 |
PubMed ID | 26198764 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26198764 |
Study | Genome-wide association study of schizophrenia in Ashkenazi Jews. |
Disease/Trait | Schizophrenia |
Initial sample | 1,505 Ashkenazi Jewish founder cases, 2,553 Ashkenazi Jewish founder controls |
Replication sample | NA |
Region | 10p15.3 |
Chromosome id | chr10 |
Chromosome position | 2315508 |
Reported gene | LINC00701 |
Mapped gene | LINC00701 - LOC105376349 |
Upstream gene id | 399708 |
Downstream gene id | 105376349 |
SNP gene ids | |
Upstream gene distance | 434 |
Downstream gene distance | 2918 |
SNP risk allele | rs12412942-A |
SNPs | rs12412942 |
Merged | |
SNP id current | 12412942 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | |
Or beta | 1.2820514 |
%95 Ci | [NR] |
Platform | Illumina [up to 9792010] (imputed) |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST003050 |