SNP Detail For rs1239947
1.Mapping Information
Human SNP ID rs1239947
Human chromosome chr13
Human SNP position 50532419
Pig chromosome chr11
Pig SNP position 17555104
2.Annotation Information
PubMed ID18391951
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/18391951
StudyMany sequence variants affecting diversity of adult human height.
Disease/TraitHeight
Initial sample30,968 European ancestry individuals
Replication sample8,541 European ancestry individuals
Region13q14.3
Chromosome idchr13
Chromosome position50532419
Reported geneDLEU7
Mapped geneDLEU1 - DLEU7
Upstream gene id10301
Downstream gene id220107
SNP gene ids
Upstream gene distance3776
Downstream gene distance163131
SNP risk allelers1239947-G
SNPsrs1239947
Merged0
SNP id current1239947
Contextintron_variant
Intergenic1
Allele frequency0.35
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta3.8
%95 Ci[2.23-5.37] % s.d. increase
PlatformAffymetrix, Illumina [up to 304226]
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST000175