SNP Detail For rs12361953
1.Mapping Information
Human SNP ID rs12361953
Human chromosome chr11
Human SNP position 24589584
Pig chromosome chr2
Pig SNP position 38116670
2.Annotation Information
PubMed ID22881374
JournalAnn Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22881374
StudyGenome-wide association and linkage study in the Amish detects a novel candidate late-onset Alzheimer disease gene.
Disease/TraitAlzheimer__s disease (late onset)
Initial sample109 Amish cases, 689 Amish controls
Replication sampleNA
Region11p14.3
Chromosome idchr11
Chromosome position24589584
Reported geneLUZP2
Mapped geneLUZP2
Upstream gene id
Downstream gene id
SNP gene ids338645
Upstream gene distance
Downstream gene distance
SNP risk allelers12361953-C
SNPsrs12361953
Merged0
SNP id current12361953
Contextintron_variant
Intergenic0
Allele frequency0.15
P value0.0000008
Pvalue mlog6.09691001300805
P value text
Or beta
%95 Ci
PlatformAffymetrix [614963]
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST001658