SNP Detail For rs12356475
1.Mapping Information
Human SNP ID rs12356475
Human chromosome chr10
Human SNP position 66001962
Pig chromosome chr14
Pig SNP position 75161428
2.Annotation Information
PubMed ID26626624
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26626624
StudyGenome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture.
Disease/TraitPsoriatic arthritis
Initial sample1,946 European ancestry cases, 4,934 European ancestry controls
Replication sampleup to 2,883 European ancestry cases, up to 14,179 European ancestry controls
Region10q21.3
Chromosome idchr10
Chromosome position66001962
Reported geneCTNNA3
Mapped geneCTNNA3
Upstream gene id
Downstream gene id
SNP gene ids29119
Upstream gene distance
Downstream gene distance
SNP risk allelers12356475-C
SNPsrs12356475
Merged0
SNP id current12356475
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta1.25
%95 CiNR
PlatformIllumina [11532644] (imputed)
CNVN
Mapped traitpsoriatic arthritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003778
Study accessionGCST003270