SNP Detail For rs12342373
1.Mapping Information
Human SNP ID rs12342373
Human chromosome chr9
Human SNP position 126640288
Pig chromosome chr1
Pig SNP position 301179081
2.Annotation Information
PubMed ID24564958
JournalMol Autism
Linkwww.ncbi.nlm.nih.gov/pubmed/24564958
StudyVariability in the common genetic architecture of social-communication spectrum phenotypes during childhood and adolescence.
Disease/TraitSocial communication problems
Initial sampleUp to 5,628 European ancestry individuals
Replication sampleNA
Region9q33.3
Chromosome idchr9
Chromosome position126640288
Reported geneLMX1B
Mapped geneLMX1B
Upstream gene id
Downstream gene id
SNP gene ids4010
Upstream gene distance
Downstream gene distance
SNP risk allelers12342373-A
SNPsrs12342373
Merged0
SNP id current12342373
Contextintron_variant
Intergenic0
Allele frequency0.09
P value0.000003
Pvalue mlog5.52287874528033
P value text(Age 8)
Or beta0.19
%95 Ci[0.11-0.27] unit increase
PlatformIllumina [2293137] (imputed)
CNVN
Mapped traitsocial communication impairment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005427
Study accessionGCST002367