Human SNP ID | rs12342373 |
---|---|
Human chromosome | chr9 |
Human SNP position | 126640288 |
Pig chromosome | chr1 |
Pig SNP position | 301179081 |
PubMed ID | 24564958 |
---|---|
Journal | Mol Autism |
Link | www.ncbi.nlm.nih.gov/pubmed/24564958 |
Study | Variability in the common genetic architecture of social-communication spectrum phenotypes during childhood and adolescence. |
Disease/Trait | Social communication problems |
Initial sample | Up to 5,628 European ancestry individuals |
Replication sample | NA |
Region | 9q33.3 |
Chromosome id | chr9 |
Chromosome position | 126640288 |
Reported gene | LMX1B |
Mapped gene | LMX1B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4010 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12342373-A |
SNPs | rs12342373 |
Merged | 0 |
SNP id current | 12342373 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.09 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (Age 8) |
Or beta | 0.19 |
%95 Ci | [0.11-0.27] unit increase |
Platform | Illumina [2293137] (imputed) |
CNV | N |
Mapped trait | social communication impairment |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005427 |
Study accession | GCST002367 |