Human SNP ID | rs12339094 |
---|---|
Human chromosome | chr9 |
Human SNP position | 87795307 |
Pig chromosome | chr10 |
Pig SNP position | 31949697 |
PubMed ID | 24665060 |
---|---|
Journal | J Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24665060 |
Study | Genome-wide association study of smoking behaviours among Bangladeshi adults. |
Disease/Trait | Smoking quantity |
Initial sample | 1,837 Bangladeshi ancestry males, 198 Bangladeshi ancestry females |
Replication sample | NA |
Region | 9q21.33 |
Chromosome id | chr9 |
Chromosome position | 87795307 |
Reported gene | NR |
Mapped gene | CTSL3P - ELF2P3 |
Upstream gene id | 392360 |
Downstream gene id | 260336 |
SNP gene ids | |
Upstream gene distance | 8423 |
Downstream gene distance | 21167 |
SNP risk allele | rs12339094-? |
SNPs | rs12339094 |
Merged | 0 |
SNP id current | 12339094 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [1211988] (imputed) |
CNV | N |
Mapped trait | smoking behaviour measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005671 |
Study accession | GCST002393 |