SNP Detail For rs12332430
1.Mapping Information
Human SNP ID rs12332430
Human chromosome chr5
Human SNP position 148170734
Pig chromosome chr2
Pig SNP position 156185401
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region5q32
Chromosome idchr5
Chromosome position148170734
Reported geneSPINK14
Mapped geneSPINK14
Upstream gene id
Downstream gene id
SNP gene ids408187
Upstream gene distance
Downstream gene distance
SNP risk allelers12332430-T
SNPsrs12332430
Merged0
SNP id current12332430
Contextintron_variant
Intergenic0
Allele frequency0.738
P value0.000005
Pvalue mlog5.30102999566398
P value text(AA)
Or beta0.03
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265