Human SNP ID | rs12316703 |
---|---|
Human chromosome | chr12 |
Human SNP position | 118402652 |
Pig chromosome | chr14 |
Pig SNP position | 36427243 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Hippocampal sclerosis |
Initial sample | 310 cases, 2,576 controls |
Replication sample | NA |
Region | 12q24.23 |
Chromosome id | chr12 |
Chromosome position | 118402652 |
Reported gene | SUDS3 |
Mapped gene | SUDS3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 64426 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12316703-G |
SNPs | rs12316703 |
Merged | 0 |
SNP id current | 12316703 |
Context | splice_region_variant |
Intergenic | 0 |
Allele frequency | 0.9171 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.6574 |
%95 Ci | [0.38-0.94] unit decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | hippocampal sclerosis of aging |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005678 |
Study accession | GCST002589 |