SNP Detail For rs12316703
1.Mapping Information
Human SNP ID rs12316703
Human chromosome chr12
Human SNP position 118402652
Pig chromosome chr14
Pig SNP position 36427243
2.Annotation Information
PubMed ID25188341
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25188341
StudyGenome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias.
Disease/TraitHippocampal sclerosis
Initial sample310 cases, 2,576 controls
Replication sampleNA
Region12q24.23
Chromosome idchr12
Chromosome position118402652
Reported geneSUDS3
Mapped geneSUDS3
Upstream gene id
Downstream gene id
SNP gene ids64426
Upstream gene distance
Downstream gene distance
SNP risk allelers12316703-G
SNPsrs12316703
Merged0
SNP id current12316703
Contextsplice_region_variant
Intergenic0
Allele frequency0.9171
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.6574
%95 Ci[0.38-0.94] unit decrease
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traithippocampal sclerosis of aging
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005678
Study accessionGCST002589