SNP Detail For rs1231206
1.Mapping Information
Human SNP ID rs1231206
Human chromosome chr17
Human SNP position 2222311
Pig chromosome chr12
Pig SNP position 50172847
2.Annotation Information
PubMed ID21378990
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21378990
StudyLarge-scale association analysis identifies 13 new susceptibility loci for coronary artery disease.
Disease/TraitCoronary heart disease
Initial sample22,233 European ancestry cases, 64,762 European ancestry controls
Replication sample56,682 European ancestry cases and controls
Region17p13.3
Chromosome idchr17
Chromosome position2222311
Reported geneintergenic
Mapped geneSMG6
Upstream gene id
Downstream gene id
SNP gene ids23293
Upstream gene distance
Downstream gene distance
SNP risk allelers1231206-A
SNPsrs1231206
Merged0
SNP id current1231206
Contextintron_variant
Intergenic0
Allele frequency0.37
P value0.0000000009
Pvalue mlog9.04575749056067
P value text
Or beta1.07
%95 Ci[1.05-1.09]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST000998